Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs73047078 chr7:2097156 G/A 4.14E-9 257 30.73 37.17 5.1 KM Plot
SARC rs73047097 chr7:2099846 C/G 4.14E-9 257 30.73 37.17 5.1 KM Plot
SARC rs73047102 chr7:2100009 G/A 4.58E-9 256 30.75 37.17 5.1 KM Plot
SARC rs73073022 chr12:26063541 G/C 1.73E-5 258 33.55 30.93 16.17 KM Plot
SARC rs73074809 chr12:26080345 A/G 2.61E-6 257 33.2 27.7 16.17 KM Plot
SARC rs73074810 chr12:26080393 C/T 2.61E-6 257 33.2 27.7 16.17 KM Plot
SARC rs73074813 chr12:26080807 C/T 2.67E-6 257 33.55 27.25 16.17 KM Plot
SARC rs73214229 chr2:20086287 C/T 9.38E-5 249 32.78 35.17 9.7 KM Plot
SARC rs7324447 chr13:114889995 C/T 9.48E-5 258 37.63 31.27 28.33 KM Plot
SARC rs73292753 chr12:26106116 T/C 1.22E-5 248 33.2 31.25 13.47 KM Plot
SARC rs7334197 chr13:49110661 A/C 3.79E-8 258 32.6 27.3 5.47 KM Plot
SARC rs73438537 chr15:75328256 C/T 3.98E-5 249 32.88 27.1 8.87 KM Plot
SARC rs73438569 chr15:75354486 T/A 3.53E-5 253 33.17 30.3 8.87 KM Plot
SARC rs73489720 chr15:81301285 A/C 9.64E-6 257 31.42 34.83 7.82 KM Plot
SARC rs73789436 chr6:154627822 C/T 5.44E-15 251 31.97 28.33 1.17 KM Plot